PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010548749.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family NAC
Protein Properties Length: 334aa    MW: 38320.6 Da    PI: 6.5061
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010548749.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM155.13e-48101551129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkklelee................vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk 79 
                     lppGfrFhP+d el+++yL +k+++k  + ++                 + e+d++++ePw+Lp+ +k + kewyfFs rd+ky+tg r+nrat 
  XP_010548749.1  10 LPPGFRFHPSDAELLCHYLLNKIRSKFSHYDHdhdddgeanmrkggntDLVEIDLHTCEPWQLPEGAKLNAKEWYFFSFRDRKYSTGYRTNRATV 104
                     79**********************9995553356678889999999855***************8888899************************ PP

             NAM  80 sgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                     sgyWkatgkd+ v++  ++++vg++ktLvfy++rap+g kt+Wvmhe+rle
  XP_010548749.1 105 SGYWKATGKDRMVVDPrTRRTVGMRKTLVFYRNRAPNGIKTTWVMHEFRLE 155
                     **************9867788***************************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.75E-548173IPR003441NAC domain
PROSITE profilePS5100552.59910173IPR003441NAC domain
PfamPF023654.4E-2611154IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MGLKDIGAKL PPGFRFHPSD AELLCHYLLN KIRSKFSHYD HDHDDDGEAN MRKGGNTDLV  60
EIDLHTCEPW QLPEGAKLNA KEWYFFSFRD RKYSTGYRTN RATVSGYWKA TGKDRMVVDP  120
RTRRTVGMRK TLVFYRNRAP NGIKTTWVMH EFRLECPSAP PEEDWVLCRV FNKCKESQIE  180
DNESRFASST PPYATNYTQM ARSSPPLRNN DHNHHREIPC GWEQIYRPSS SPPSSNIDHP  240
EDQTMKIPCG WDQMMGLVSS SSSHGPQTHE SLLNLLYGSG LEFCDDENDY GNVFSGMDLE  300
KGSSSSDGLV SDIHLENDRL SFEIHKTTVA FHYQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A4e-431017817170NO APICAL MERISTEM PROTEIN
1ut4_B4e-431017817170NO APICAL MERISTEM PROTEIN
1ut7_A4e-431017817170NO APICAL MERISTEM PROTEIN
1ut7_B4e-431017817170NO APICAL MERISTEM PROTEIN
3swm_A5e-431017820173NAC domain-containing protein 19
3swm_B5e-431017820173NAC domain-containing protein 19
3swm_C5e-431017820173NAC domain-containing protein 19
3swm_D5e-431017820173NAC domain-containing protein 19
3swp_A5e-431017820173NAC domain-containing protein 19
3swp_B5e-431017820173NAC domain-containing protein 19
3swp_C5e-431017820173NAC domain-containing protein 19
3swp_D5e-431017820173NAC domain-containing protein 19
4dul_A4e-431017817170NAC domain-containing protein 19
4dul_B4e-431017817170NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010548749.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010548749.10.0PREDICTED: NAC domain-containing protein 21/22-like
TrEMBLV4P4I71e-122V4P4I7_EUTSA; Uncharacterized protein
STRINGXP_010548749.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM34362862
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.11e-121NAC domain containing protein 74