PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010540752.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family G2-like
Protein Properties Length: 397aa    MW: 44189.2 Da    PI: 9.8483
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010540752.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.98.4e-32213266255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm vk+Ltl+hvkSHLQ+YR+
  XP_010540752.1 213 PRMRWTTTLHARFVHAVEMLGGHERATPKSVLELMAVKDLTLAHVKSHLQMYRT 266
                     9****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.33E-15210266IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.5E-28211266IPR009057Homeodomain-like
TIGRFAMsTIGR015574.3E-23213266IPR006447Myb domain, plants
PfamPF002493.3E-7214265IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    Send to blast
MELFPAQPDL SLRISPPNTK PSSTWQRRST EAAENLDLGF WRRALDSRTD SKTESSFDLS  60
LSNGSYLSRS PVSISSADSN TLPNFNGSKI LNPLPFQTDQ QVVQEQLHGF LRDNLNILRP  120
IRGIPLYQNP PHHTSHPPSF SFDPSSLIPS SSSSSSSCSL VNNNISATKV ANSGLTTTNY  180
HPSHHHRHHH GLMTNNRSRF MPRFPVKRSM RAPRMRWTTT LHARFVHAVE MLGGHERATP  240
KSVLELMAVK DLTLAHVKSH LQMYRTVKTT DKAAAASSGQ SDVIETVSSG DNSDDCIFRV  300
NRKSRQNNEM QNQREISNGD KGNDYRGLWS SSSGETRLYG MTNDTVAEIT PPSKEEMDPK  360
CLSYERISSE DGSSSSIVSG RSPKKPSLEF TLGRPQL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010540752.10.0PREDICTED: probable transcription factor KAN2
SwissprotQ9C6161e-120KAN2_ARATH; Probable transcription factor KAN2
TrEMBLA0A0D2ZR211e-139A0A0D2ZR21_BRAOL; Uncharacterized protein
STRINGBra033844.1-P1e-133(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM53872850
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.11e-113G2-like family protein