PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010535245.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family TCP
Protein Properties Length: 390aa    MW: 42504.4 Da    PI: 8.6797
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010535245.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP116.14.5e-3636116288
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg 88 
                     +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LGfd++sk+++WL+++ak++i+el++++  ++ e+     ++++  ++ +
  XP_010535245.1  36 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSIDELAELPPWNPAET----LRNAK--PRRA 116
                     79**************************************************************33333222....11111..1111 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.4E-3136101IPR005333Transcription factor, TCP
PROSITE profilePS5136934.0163896IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
MTTTTVSPNM IHQWWTATPP PPSSTTTGLY HRRRSTGRKD RHSKVCTAKG PRDRRVRLSA  60
HTAIQFYDVQ DRLGFDRPSK AVDWLIKKAK TSIDELAELP PWNPAETLRN AKPRRAAKAK  120
ASPPPQPPPP PSLTHEGQFG APVVGFAGED NGLGFLPASL DSDSIADTIK SFFPVGGGGA  180
CASTEALKTI SFCQSQDLRL SLQSFQDPPP LLLHHNHRTH QTEPLLFAGQ NHPLGFDAST  240
SPWEQSHHQH SHHQSSEIGR LQRLVAWNSG GVSDTGGGGG GGEFVFASPP ATTPFQPVSV  300
CSHSQLFSSQ RGPLQSINTP MIRAWLDPHH HHIDDLHYHI PHQPAIPGIG FGSQTGEFSG  360
FRIPARIQGQ EEEHDSITNK PSSASSVSRH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010535245.10.0PREDICTED: transcription factor TCP4
SwissprotQ8LPR51e-124TCP4_ARATH; Transcription factor TCP4
TrEMBLD7L3Y21e-126D7L3Y2_ARALL; Putative uncharacterized protein
STRINGscaffold_301743.11e-126(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM24082771
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.31e-109TCP family protein