PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010534106.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family TCP
Protein Properties Length: 391aa    MW: 40625.9 Da    PI: 9.0351
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010534106.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP130.61.5e-4079173398
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaak 96 
                     ++k++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++  ++s +ss+   +++++ +++a+
  XP_010534106.1  79 AAKKPSKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFStLSVSLRSSGT--TISASPSKSAP 171
                     6899****************************************************************88865555555555..33322222222 PP

             TCP  97 sk 98 
                      +
  XP_010534106.1 172 LS 173
                     22 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036347.4E-3884181IPR005333Transcription factor, TCP
PROSITE profilePS5136928.84484138IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    Send to blast
MESRNDQNLH GRKQEAGTAT AALHLSSAEN LPPQRSLVSF MGSVSGQNVA AASSAVSTST  60
TSSSTNTSSG GSLTVVKSAA KKPSKDRHTK VDGRGRRIRM PAMCAARVFQ LTRELGHKSD  120
GETIEWLLQQ AEPAIIAATG TGTIPANFST LSVSLRSSGT TISASPSKSA PLSFHSAGLS  180
LYDDLNATNG SSVAAVDASR KLLNAAAQNA TVFGFHHQIY PPILSDASMR NMTDLTKPYR  240
EDLFKESSVA ADPSGSSPKT GRTQEPETGQ GRATANFMPQ PMWAVAPATT NGGGTFWMLP  300
MGGSGGGAVQ EQQQQQHMWA FDAGHYSGSG RAGSMMSIGG QQLGLGVTES NMAAIGGGRG  360
GLAMTLDQHQ QQQHQTQRGE SGGDGNATDN S
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00228DAPTransfer from AT1G72010Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010534106.10.0PREDICTED: transcription factor TCP22-like
SwissprotQ9C7G41e-127TCP22_ARATH; Transcription factor TCP22
TrEMBLR0I9T31e-133R0I9T3_9BRAS; Uncharacterized protein
STRINGAT1G72010.11e-124(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM70532441
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72010.11e-118TCP family protein