PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010529021.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family NAC
Protein Properties Length: 222aa    MW: 25327.4 Da    PI: 6.9647
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010529021.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM85.21.3e-2651363128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkya.tgkrknratk....sgyWkatgkd 89 
                     +G++F+P+d++l+  +L+ kv+g   ++   ik+vd+y +ePw Lp+ + +   +++ewy+F+k+   ++ + kr++r+++     g+Wk+t  +
  XP_010529021.1   5 VGLKFRPNDKDLI-SHLRWKVNGGGDSF---IKDVDVYGSEPWLLPHVT-EplfQDNEWYYFVKKTIDSTrKRKRQSRQVQkkenGGTWKSTTGE 94 
                     7************.89*********655...***************533.2355999*****999766552456677753334459********* PP

             NAM  90 kevlsk.kgelvglkktLvfykg..rapkgektdWvmheyrl 128
                     +e+ +  +  ++g  + L+f ++   + k  ktdW+m eyrl
  XP_010529021.1  95 EEIRDGgNAVVIGHARNLTFMENevGSTKQMKTDWLMREYRL 136
                     ****97555669*********6522566778*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100535.4043152IPR003441NAC domain
SuperFamilySSF1019417.45E-334152IPR003441NAC domain
PfamPF023651.3E-155136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MGSIVGLKFR PNDKDLISHL RWKVNGGGDS FIKDVDVYGS EPWLLPHVTE PLFQDNEWYY  60
FVKKTIDSTR KRKRQSRQVQ KKENGGTWKS TTGEEEIRDG GNAVVIGHAR NLTFMENEVG  120
STKQMKTDWL MREYRLPSQE SQEWVVCRIR RKSNGRVNGD GRRMNQGNLG INSSIGQNVE  180
DAAFQPFANI VDDEYAWIQG LDIDELSSLL NEPFHGGALP LP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-14615420167NO APICAL MERISTEM PROTEIN
1ut4_B1e-14615420167NO APICAL MERISTEM PROTEIN
1ut7_A1e-14615420167NO APICAL MERISTEM PROTEIN
1ut7_B1e-14615420167NO APICAL MERISTEM PROTEIN
3swm_A1e-14615423170NAC domain-containing protein 19
3swm_B1e-14615423170NAC domain-containing protein 19
3swm_C1e-14615423170NAC domain-containing protein 19
3swm_D1e-14615423170NAC domain-containing protein 19
3swp_A1e-14615423170NAC domain-containing protein 19
3swp_B1e-14615423170NAC domain-containing protein 19
3swp_C1e-14615423170NAC domain-containing protein 19
3swp_D1e-14615423170NAC domain-containing protein 19
4dul_A1e-14615420167NAC domain-containing protein 19
4dul_B1e-14615420167NAC domain-containing protein 19
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010529021.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010529021.11e-165PREDICTED: NAC domain-containing protein 6-like
STRINGXP_010529021.11e-164(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM13336429
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03490.17e-19NAC domain containing protein 6