PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010524968.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family G2-like
Protein Properties Length: 323aa    MW: 37040.2 Da    PI: 6.5184
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010524968.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like34.35.2e-111233355
         G2-like 33 lelmkvkgLtlehvkSHLQkYRl 55
                    +++m+v+gLtl+h+kSHLQkYRl
  XP_010524968.1  1 MKVMGVPGLTLYHLKSHLQKYRL 23
                    79********************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.1E-10124IPR009057Homeodomain-like
PfamPF143799.5E-2071115IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MKVMGVPGLT LYHLKSHLQK YRLSKNLNGQ ANYQKYQKYR LVAMAEEKSH DANEIHTESF  60
SIGQPTEKNL PISEALQMQV EVQQRLHEQL ERHLQLRIEA HGKYLQAVLE KAHETLGKQN  120
LGTDGIEAAK VQLSELASKV SAEYSHTTFQ EPKELQSLHP QQMETYPSVC SLDSSLTSRE  180
RNQTIPKIVE NRLGLRPYHG DSKSEQKEIS EQQLFQRLEL AWSEGQRETR TYFSTMVNDT  240
EARISSSERS LGNLSIGIGL YGQKGQENTG YTEERTKKDE DCKFETRNQK GMDSTTELDL  300
NTHGENYDTA RPKQFDLNGF SWN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010524968.10.0PREDICTED: uncharacterized protein LOC104802861 isoform X4
RefseqXP_010524969.10.0PREDICTED: uncharacterized protein LOC104802861 isoform X4
TrEMBLE3VS071e-145E3VS07_ARATH; Myb family transcription factor
STRINGAT3G04030.31e-142(Arabidopsis thaliana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04030.21e-146G2-like family protein