PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010522115.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family TCP
Protein Properties Length: 339aa    MW: 37312.8 Da    PI: 7.0229
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010522115.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP114.41.5e-3524139189
             TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...............ssssasec.eaesss 79 
                     a+g+kdrhsk+ T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai++l+++               ss+++ ++ +a+++ 
  XP_010522115.1  24 ATGRKDRHSKVFTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLNESqelalrdvqggkaaeSSDPNFQMvDAKDDD 118
                     589**************************************************************999999998887765555554444333333 PP

             TCP  80 ssasnsssg...........k 89 
                       +++++ +            
  XP_010522115.1 119 DDHHHQTVQfssslvaplanL 139
                     333333333444455555542 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.9E-3025119IPR005333Transcription factor, TCP
PROSITE profilePS5136932.4292785IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009965Biological Processleaf morphogenesis
GO:0030154Biological Processcell differentiation
GO:0045962Biological Processpositive regulation of development, heterochronic
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MGLKSSGSGG GEIVQVEGGH IVRATGRKDR HSKVFTSKGP RDRRVRLSAH TAIQFYDVQD  60
RLGYDRPSKA VDWLIKKAKS AIDKLNESQE LALRDVQGGK AAESSDPNFQ MVDAKDDDDD  120
HHHQTVQFSS SLVAPLANLD PEDAMKTFFP TSSTNSSINF QNYPHDIISR TANLNQDLGL  180
SLHPSFHGDS GQAGSSTDQT LFATFEANNF QRMSGWNSEL TPEQRGFLVS SSSHQPSVPT  240
LLNHQQTLFL GQGPPLLSHQ RGTLQSSFLQ PFRSWDHHTD HHHHHHQQNQ SSVFASQFGS  300
HGIMQGLSVH NRIHGEEGEG LGPHRPSASS SSPPHNSHP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010522114.10.0PREDICTED: transcription factor TCP10
RefseqXP_010522115.10.0PREDICTED: transcription factor TCP10
SwissprotO822778e-87TCP10_ARATH; Transcription factor TCP10
TrEMBLD7LCY32e-90D7LCY3_ARALL; Putative uncharacterized protein
STRINGscaffold_401627.15e-90(Arabidopsis lyrata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31070.18e-81TCP domain protein 10