PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7DS_78B5508C0.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 458aa    MW: 51510.1 Da    PI: 4.5438
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7DS_78B5508C0.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM107.71.4e-33862251128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.. 79 
                            lp+G++F+P+d+el+ + L+k+ ++ +     ++++   ++e+ +i++++P++Lp  vk++ +  +fF+++ k+y+tg+rk+r+++  
  Traes_7DS_78B5508C0.2  86 LPKGVKFDPSDQELLGHLLAKHDRAGSqphpfIDEFIPtVEEAdGICYTHPQKLP-GVKQDGSVSHFFHRTFKAYNTGTRKRRKINts 172
                            799************999988755554466553333333666656**********.677888899******************75444 PP

                    NAM  80 ...sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                               + +W++tgk+k+v++ +g++ g+kk++v+y  + +  k++kt+Wvmh+y+l
  Traes_7DS_78B5508C0.2 173 dlaDVRWHKTGKTKPVMV-DGQHLGCKKIMVLYmsTVKGGKPKKTNWVMHQYHL 225
                            555889************.999***********6644666777*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.59E-3871244IPR003441NAC domain
PROSITE profilePS5100531.58886244IPR003441NAC domain
PfamPF023651.4E-1487225IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
ICIEVVIILL ELWSNFSVFI YLNSTANNFC RTSWLIDSQR IASKIKNVSG SRDLSKQKWL  60
SNPTKECPNC SHSIDNSDVV HQWPGLPKGV KFDPSDQELL GHLLAKHDRA GSQPHPFIDE  120
FIPTVEEADG ICYTHPQKLP GVKQDGSVSH FFHRTFKAYN TGTRKRRKIN TSDLADVRWH  180
KTGKTKPVMV DGQHLGCKKI MVLYMSTVKG GKPKKTNWVM HQYHLGTGED EQNGEYVVSK  240
LFFQQQNGQK SALELTNTDV METTVAEADL TDLPEPTAEE EDERISSISN QEFLLNNEYN  300
ADEEALHSHE HNTYQENGDC EIKMEEKAAD ENAVYPSSEK PEDGDNPPSQ DPNLWEGDSQ  360
FLLDSQQLAE NLAICDEFLQ SQTSCGDGDE PGSIKPRLAV YAQLPVEDLK KDLQEYKDLG  420
PSDNANLEPE NNAELRLSQL EFSQDSYTIG IFTGQAAD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004965197.10.0PREDICTED: NAC domain-containing protein 8-like
SwissprotQ6NQK21e-126NAC8_ARATH; NAC domain-containing protein 8
TrEMBLW5I8D90.0W5I8D9_WHEAT; Uncharacterized protein
STRINGORGLA06G0096700.10.0(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP67853651
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-123NAC family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]