PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7AS_6E6A5CD04.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 452aa    MW: 50840.3 Da    PI: 4.6007
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7AS_6E6A5CD04.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM107.51.6e-33792181128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.. 79 
                            lp+G++F+P+d+el+ + L+k+ ++ +     ++++   +ke+ +i++++P++Lp  vk++ +  +fF+++ k+y+tg+rk+r+++  
  Traes_7AS_6E6A5CD04.1  79 LPKGVKFDPSDQELLGHLLAKHDKAGSqphpfIDEFIPtVKEAdGICYTHPQKLP-GVKQDGSISHFFHRTFKAYNTGTRKRRKINts 165
                            799************999987655444456553333334777756**********.677777888******************75444 PP

                    NAM  80 ...sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                               + +W++tgk+k+v++ +g++ g+kk++v+y  + +  k++kt+Wvmh+y+l
  Traes_7AS_6E6A5CD04.1 166 dlaDVRWHKTGKTKPVMV-DGQHLGCKKIMVLYmsTVKGGKPKKTNWVMHQYHL 218
                            555889************.999***********6644666777*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-3764237IPR003441NAC domain
PROSITE profilePS5100531.51679237IPR003441NAC domain
PfamPF023651.1E-1480218IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000077Biological ProcessDNA damage checkpoint
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010332Biological Processresponse to gamma radiation
GO:0040020Biological Processregulation of meiotic nuclear division
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    Send to blast
MLLELWSNFS VFICLNSTAD NFCRTSWLID SQRIASKIKN VSGSRDLSKQ KWLSNPTKEC  60
PNCSHIIDNS DVVHQWPGLP KGVKFDPSDQ ELLGHLLAKH DKAGSQPHPF IDEFIPTVKE  120
ADGICYTHPQ KLPGVKQDGS ISHFFHRTFK AYNTGTRKRR KINTSDLADV RWHKTGKTKP  180
VMVDGQHLGC KKIMVLYMST VKGGKPKKTN WVMHQYHLGT GEDEQNGEYV VSKLFFQQQN  240
GEKSALELTN TDVMQTTVAE ADLTDLPEPT AEEEDERISS ISNQEFLLNN EYNADEEALH  300
SHEHNTYQQE NGDCEIKMEE KAADENAVYP SSEKPEDGDN PPSQDPNPWE GDSQFLLDSQ  360
QLAENLAICD EFLQSQTSCG DGDEPGSIKP RLAVYAQLPV EDLKKDLQEY KDLGPSDNAN  420
LEPENNAELR LSQLEFSQDS YTMGIFTGQA AD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004965197.10.0PREDICTED: NAC domain-containing protein 8-like
SwissprotQ6NQK21e-126NAC8_ARATH; NAC domain-containing protein 8
TrEMBLW5HFG40.0W5HFG4_WHEAT; Uncharacterized protein
STRINGORGLA06G0096700.10.0(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP67853651
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-124NAC family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]