PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5BL_F3018E8CA.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 278aa    MW: 29142.1 Da    PI: 9.6151
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5BL_F3018E8CA.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_177.31.9e-24172235164
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 
                            e+elkrerrkq+NRe+ArrsR+RK++e+eeL++kv eL+a N +L++el++lkk ++++++e++
  Traes_5BL_F3018E8CA.1 172 ERELKRERRKQSNRESARRSRLRKQQECEELAQKVSELTAANGTLRSELDQLKKDCKTMETENK 235
                            89*********************************************************99985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.3E-18165232No hitNo description
PfamPF001702.9E-22172235IPR004827Basic-leucine zipper domain
SMARTSM003388.8E-22172236IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.082174237IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.22E-11175230No hitNo description
CDDcd147021.75E-18177227No hitNo description
PROSITE patternPS000360179194IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MYHHPAAAYY AHAHASMAAG VPYMAGESAS AAGKGKRAGK TRRVPSGEIN SSSGSGDAGS  60
QGSSEKGNAG ANQKGSSSSA KRRKSGAANT EGEPSQATTV QNAVTEPPLE DKERSASKLL  120
VLAPGRAALT SAAPNLNIGM DPLSASPSSL VQGEVNAAAS SQSNASLSQM DERELKRERR  180
KQSNRESARR SRLRKQQECE ELAQKVSELT AANGTLRSEL DQLKKDCKTM ETENKQLMGK  240
ILSHDDKMQQ SEGPSVVTTL SIQVEAPDPH QGGDGKAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1188194RRSRLRK
2188195RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankTAU079330.0U07933.1 Triticum aestivum Chinese spring DNA-Binding protein (EmBP-1a) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020175793.11e-147DNA-binding protein EMBP-1
SwissprotP250321e-154EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLA0A3B6LVV70.0A0A3B6LVV7_WHEAT; DNA-Binding protein
TrEMBLQ415080.0Q41508_WHEAT; DNA-Binding protein
STRINGTraes_5BL_F3018E8CA.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-24basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]