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Plant Transcription
Factor Database
v4.0
Previous version: v1.0,
v2.0,
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_3DL_564FE4223.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 73aa MW: 8090.21 Da PI: 10.6298 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.5 | 1.8e-11 | 31 | 71 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r R + +N ++ +Lr+++P+ +K++K++iL+ A+eYI++Lq Traes_3DL_564FE4223.1 31 RLRGRTLNGKLYTLRSVVPNI-----TKMDKVSILRDAIEYIHQLQ 71 677889**************7.....7******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 13.96 | 21 | 70 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 3.27E-13 | 23 | 73 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.9E-11 | 27 | 73 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 5.4E-6 | 27 | 73 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.60E-11 | 31 | 73 | No hit | No description |
Pfam | PF00010 | 3.6E-9 | 31 | 71 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 73 aa Download sequence Send to blast |
NWSSPDTGYS SSPVVSAAVS ASKSNVVVTR RLRGRTLNGK LYTLRSVVPN ITKMDKVSIL 60 RDAIEYIHQL QEQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010929341.1 | 3e-17 | PREDICTED: transcription factor bHLH35 isoform X2 | ||||
Refseq | XP_010929342.1 | 3e-17 | PREDICTED: transcription factor bHLH35 isoform X3 | ||||
Swissprot | Q2HIV9 | 4e-15 | BH035_ARATH; Transcription factor bHLH35 | ||||
TrEMBL | M8CG56 | 3e-44 | M8CG56_AEGTA; Transcription factor bHLH35 | ||||
TrEMBL | W5DA23 | 7e-47 | W5DA23_WHEAT; Uncharacterized protein | ||||
STRING | GSMUA_Achr6P30900_001 | 6e-17 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1044 | 38 | 133 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57150.3 | 4e-11 | bHLH family protein |
Publications ? help Back to Top | |||
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