PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_1DL_23D036A85.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 404aa    MW: 42897.5 Da    PI: 9.867
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_1DL_23D036A85.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.74.6e-22265327163
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                            e+e+kre+rkq+NRe+ArrsR+RK+ae+eeL++ v++L+aeN++Lk+e+ +l+k ++kl+ e+
  Traes_1DL_23D036A85.1 265 EREVKREKRKQSNRESARRSRLRKQAETEELATQVESLTAENTSLKSEIGKLTKSSEKLRIEN 327
                            799*******************************************************98776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077774.2E-2823114IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1705.9E-17260324No hitNo description
PfamPF001709.5E-21265327IPR004827Basic-leucine zipper domain
SMARTSM003381.2E-21265329IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.162267330IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.44E-11268323No hitNo description
CDDcd147021.41E-21270318No hitNo description
PROSITE patternPS000360272287IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MCQNSLLMKT AYCKDRQAFS KGMAHDEAVA AQKTGKSGSP PKDQPAPSPY PDWSAMQAYY  60
SSGVMPPAYF APAMAAGHPP PPYMWGPQHM MPPPFGTPYA MYPHGGAYPH PLVPMMASPL  120
SVEPAKSANS KDKSSNKKLK EIDGSAVSTG SGNSKKTSSS GDYSGEGSSD VNDLKVSGTP  180
RKRSLDGGFD TEATVAARNK DVVASSPIIR NGAILSNQCF PAPVIKPSVT NVANSRAIGT  240
PVSPLPGVMG PIHTGISTEL SSKDEREVKR EKRKQSNRES ARRSRLRKQA ETEELATQVE  300
SLTAENTSLK SEIGKLTKSS EKLRIENSAL VVKLKGTAAP TSAEMPLDKT AVAAPSSSPR  360
VVENFLSMID DTSKSGVKNH MEHSEPKLRQ LLGSSATTDV VAAN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1281287RRSRLRK
2281288RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT2254640.0KT225464.1 Triticum aestivum GBF1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020151704.10.0common plant regulatory factor 1-like
RefseqXP_020151705.10.0common plant regulatory factor 1-like
TrEMBLA0A3B6A1S60.0A0A3B6A1S6_WHEAT; Uncharacterized protein
STRINGTraes_1DL_23D036A85.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01120.12e-28G-box binding factor 2
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]