PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRAES3BF084200010CFD_t1
Common NameTRAES_3BF084200010CFD_c1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 223aa    MW: 23968.5 Da    PI: 4.5981
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRAES3BF084200010CFD_t1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.94.4e-172675255
                      AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                             +ykGVr +k +grWv+eIr p++   r r++lg++ +ae+Aa+a +aa+ +l+g
  TRAES3BF084200010CFD_t1 26 RYKGVRLRK-WGRWVSEIRMPNS---RERIWLGSYQSAEKAARAFDAAAVCLRG 75
                             7******99.**********933...5*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008477.2E-102675IPR001471AP2/ERF domain
SuperFamilySSF541713.27E-182684IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.6E-272685IPR001471AP2/ERF domain
PROSITE profilePS5103221.6672684IPR001471AP2/ERF domain
CDDcd000181.07E-172685No hitNo description
SMARTSM003801.3E-302690IPR001471AP2/ERF domain
PRINTSPR003672.0E-82738IPR001471AP2/ERF domain
PRINTSPR003672.0E-84965IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MDGASSTSGG EGSAEPHPSP PPPERRYKGV RLRKWGRWVS EIRMPNSRER IWLGSYQSAE  60
KAARAFDAAA VCLRGSRAGS LNFPEFPPDV QHIPGIVPTP ERIQAAATRH ANRAYPIPAG  120
RTTTVTTAMP SQEVTSTSND IAVESSPSAG SAAAYDDGLD WSFMDALPSM PASSAPGTNV  180
PVMDDVMFGF SPMPPPTPSE EADEDTIHDD GDDHAFISDL WRF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020191564.11e-124ethylene-responsive transcription factor ERF018-like
TrEMBLA0A077RQT01e-160A0A077RQT0_WHEAT; Uncharacterized protein
STRINGEMT285181e-122(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP86132144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.17e-26ERF family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]