PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.3847s0010.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 169aa    MW: 18022.1 Da    PI: 8.4884
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.3847s0010.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.92.1e-172474155
                     AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                            +++kGVr++k +g+Wv+eIr+p   gk+ r +lg++ t+e Aa a++ a  +l+g
  SapurV1A.3847s0010.1.p 24 KKFKGVRRRK-WGKWVSEIRVP---GKQERLWLGSYSTPEAAAVAHDIASYCLRG 74
                            59*****998.**********8...556*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.75E-232484No hitNo description
Gene3DG3DSA:3.30.730.102.0E-242584IPR001471AP2/ERF domain
SMARTSM003802.2E-282590IPR001471AP2/ERF domain
SuperFamilySSF541713.14E-172578IPR016177DNA-binding domain
PROSITE profilePS5103221.432584IPR001471AP2/ERF domain
PfamPF008478.9E-102574IPR001471AP2/ERF domain
PRINTSPR003675.2E-82637IPR001471AP2/ERF domain
PRINTSPR003675.2E-84864IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    Send to blast
MSGGSSSSSS SRADQEGGAS AAQKKFKGVR RRKWGKWVSE IRVPGKQERL WLGSYSTPEA  60
AAVAHDIASY CLRGPSSIES LNLPLLLPAS VRGDMSPKSV QKAASDAGMA IDAQIIRNRV  120
PENEVRFGTG SGTVNHGLWE PAGGDHGDDW HGNSIRMREG DISIEDYL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-141484272Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12632KGVRRRK
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.3847s0010.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006376167.13e-97ethylene-responsive transcription factor ERF020 isoform X1
SwissprotO805423e-42ERF19_ARATH; Ethylene-responsive transcription factor ERF019
TrEMBLA9PL997e-96A9PL99_POPTR; RAP2-like protein
STRINGPOPTR_0013s10420.11e-96(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54893054
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.12e-44ERF family protein
Publications ? help Back to Top
  1. Scarpeci TE,Frea VS,Zanor MI,Valle EM
    Overexpression of AtERF019 delays plant growth and senescence, and improves drought tolerance in Arabidopsis.
    J. Exp. Bot., 2017. 68(3): p. 673-685
    [PMID:28204526]