PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.3143s0020.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 231aa    MW: 25212.1 Da    PI: 8.2125
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.3143s0020.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.7e-193281255
                     AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                            +++GVr ++ +gr++AeIrdps+   + r++lg+f+taeeAa a++aa+++++g
  SapurV1A.3143s0020.1.p 32 HFRGVRKRP-WGRFAAEIRDPSK---KSRVWLGTFDTAEEAACAYDAAAREFRG 81
                            69*******.**********965...6************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003808.3E-393295IPR001471AP2/ERF domain
PfamPF008471.6E-123281IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.6E-313289IPR001471AP2/ERF domain
CDDcd000181.16E-193290No hitNo description
PROSITE profilePS5103222.8933289IPR001471AP2/ERF domain
SuperFamilySSF541711.83E-213289IPR016177DNA-binding domain
PRINTSPR003672.6E-103344IPR001471AP2/ERF domain
PRINTSPR003672.6E-105571IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MAPREKTASM KVNGGPCVGA VGGGGGKEKE VHFRGVRKRP WGRFAAEIRD PSKKSRVWLG  60
TFDTAEEAAC AYDAAAREFR GSKAKTNFAY PSYENVRENT ISVDSNNKNN SCGVVGNSNN  120
NQSPSQSSTV EFSSTDTPLD LNLGPAVSTV RLPFQPMVMN RQQVIYFDPV KSRCQKMVFD  180
GGHHHPNQPM SFSCDSDSSS VVFDLNNQDI KTPRSFVDLD LNFPPQPEIA *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-223288259ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.3143s0020.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006377397.21e-101ethylene-responsive transcription factor 11
TrEMBLA0A2K1YG081e-100A0A2K1YG08_POPTR; Uncharacterized protein
STRINGPOPTR_0011s05580.11e-100(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.15e-26erf domain protein 9