PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.1130s0100.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 179aa    MW: 19717 Da    PI: 6.6893
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.1130s0100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.25e-191464155
                     AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                            s y+GVr +k +g+Wv+eIr+p   gk+ r++lg+f t+e+Aa+a++ a++ ++g
  SapurV1A.1130s0100.1.p 14 SSYRGVRKRK-WGKWVSEIREP---GKKNRIWLGSFETPEMAAAAYDVAALHFRG 64
                            67*****999.**********8...5579**********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.5E-221473IPR016177DNA-binding domain
PfamPF008473.3E-121464IPR001471AP2/ERF domain
SMARTSM003802.7E-361578IPR001471AP2/ERF domain
PROSITE profilePS5103223.5511572IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-311573IPR001471AP2/ERF domain
CDDcd000185.30E-211674No hitNo description
PRINTSPR003677.7E-101627IPR001471AP2/ERF domain
PRINTSPR003677.7E-103854IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MEERNGGSHG GVSSSYRGVR KRKWGKWVSE IREPGKKNRI WLGSFETPEM AAAAYDVAAL  60
HFRGNDTKLN FPDLVHHLPK PASSSSEDIR MAAHEAAMSL RPLTAEPSRR GSSASDAGPI  120
TVRLSASQIQ AINESPLDSP KAWMQMSEIA MLESSMVFSN GIDEDQWDNK QTYSLWDP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-171676667ATERF1
3gcc_A9e-171676667ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.1130s0100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011005172.11e-107PREDICTED: ethylene-responsive transcription factor ERF021-like
SwissprotQ9C9I28e-61ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLB9IQB61e-99B9IQB6_POPTR; Uncharacterized protein
STRINGPOPTR_0019s10420.11e-100(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17773191
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.14e-63ERF family protein