PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.1111s0070.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 327aa    MW: 36465.9 Da    PI: 6.0806
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.1111s0070.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.2e-20127177155
                     AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                             ++++GVr+++ +g+W+AeIrdp   ++rkr++lg+f+taeeAa  +++a+ +l+g
  SapurV1A.1111s0070.1.p 127 KKFRGVRQRP-WGKWAAEIRDP---NRRKRVWLGTFDTAEEAATVYDRAAVRLKG 177
                             59********.**********8...335************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.22E-33127187No hitNo description
PROSITE profilePS5103223.828128185IPR001471AP2/ERF domain
SMARTSM003801.2E-36128191IPR001471AP2/ERF domain
PfamPF008472.7E-13128177IPR001471AP2/ERF domain
SuperFamilySSF541712.35E-22128186IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.7E-30128186IPR001471AP2/ERF domain
PRINTSPR003679.6E-11129140IPR001471AP2/ERF domain
PRINTSPR003679.6E-11151167IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MRLLSPHELQ PILISNPTMC VQPKVRITKH VLAKNQQLHP SSRTRQRLVR IIHTDPDATD  60
SSSDEEEEEQ ERKFVKIVKR QVSEISFLEQ DTTAPAAPSS ATSNDDQKPR RKRPSSRLPV  120
PDVSRQKKFR GVRQRPWGKW AAEIRDPNRR KRVWLGTFDT AEEAATVYDR AAVRLKGPDA  180
VTNFRTSTAT AERANFNSGS NDVKCESFDS PSSRGTGTVL ASPTLVPRQV ELTPFDLVLT  240
EKAQVADGQR ESCESSLSGA NDMSSPTSVL HYDEFTLFDS LGYCDVDAFG FEIDVPLSLP  300
NSMLSGKFFG KEEFVDLDDF LVDAMC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-21124192170ATERF1
3gcc_A9e-21124192170ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.1111s0070.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011011769.10.0PREDICTED: pathogenesis-related genes transcriptional activator PTI6-like
TrEMBLB9I7670.0B9I767_POPTR; Uncharacterized protein
STRINGPOPTR_0013s15440.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55853252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.28e-34cytokinin response factor 2