PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0601s0170.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 182aa    MW: 19867.3 Da    PI: 6.3589
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0601s0170.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.72.6e-171565155
                     AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                            s y+G+r +k rg+Wv+eIr+p   gk++r++lg+f t+e+Aa+a++ a + ++g
  SapurV1A.0601s0170.1.p 15 SSYRGIRKRK-RGKWVSEIREP---GKKTRIWLGSFQTPEMAAAAYDVAVLHFRG 65
                            67*****999.8*********8...557*********************999887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.5E-101564IPR001471AP2/ERF domain
CDDcd000182.27E-291575No hitNo description
SuperFamilySSF541711.63E-201574IPR016177DNA-binding domain
PROSITE profilePS5103222.3131673IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.8E-301674IPR001471AP2/ERF domain
SMARTSM003806.6E-351679IPR001471AP2/ERF domain
PRINTSPR003675.3E-81728IPR001471AP2/ERF domain
PRINTSPR003675.3E-83955IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MEVSDRAASH GGIASSYRGI RKRKRGKWVS EIREPGKKTR IWLGSFQTPE MAAAAYDVAV  60
LHFRGREAKL NFPELAGKLP KPASSIADHV RMAAHQAAIS LRPCTADSSH GGGSSSDAGP  120
ITVRLSPSQI QAINESPLDS PKMWMQMAEI ATLEESSMMF SNDNIEEDEW DNNQTDSLWD  180
P*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-131773663ATERF1
3gcc_A1e-131773663ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0601s0170.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002299698.15e-94ethylene-responsive transcription factor ERF021
SwissprotQ9C9I22e-61ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLB9GFN91e-92B9GFN9_POPTR; Uncharacterized protein
STRINGPOPTR_0001s18180.12e-93(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17773191
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.16e-56ERF family protein