PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0521s0050.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 234aa    MW: 26084.8 Da    PI: 4.6341
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0521s0050.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.28.5e-181666155
                     AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                            s++kGVr +k +grWv+eIr p++   r r++lg++++ae+Aa+a + a  +l+g
  SapurV1A.0521s0050.1.p 16 SKFKGVRKRK-WGRWVSEIRLPNS---RERIWLGSYDSAEKAARAFDVALFCLRG 66
                            79*****999.**********933...5*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.27E-281676No hitNo description
SuperFamilySSF541713.01E-201675IPR016177DNA-binding domain
PfamPF008479.8E-111666IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.5E-281775IPR001471AP2/ERF domain
PROSITE profilePS5103221.9311774IPR001471AP2/ERF domain
SMARTSM003806.6E-321780IPR001471AP2/ERF domain
PRINTSPR003671.3E-81829IPR001471AP2/ERF domain
PRINTSPR003671.3E-84056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MVKYSAGKPI AERRDSKFKG VRKRKWGRWV SEIRLPNSRE RIWLGSYDSA EKAARAFDVA  60
LFCLRGRVAK FNFPDNPPNI AGARSLSPAE IQEVAAKFAN SEPQRSQSDQ FETNQSVSES  120
RAESPCTSVV SESRAESPCT SAVSESRAES PCTSVVSDET VKLESSELRW DGPFLDMLMN  180
TNSSNYSAEY GIFPGFDDLH NDFFPSSLAP NLDYGEETNY DGVLEQDSFL WNF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1416741372Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11824KGVRKRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00151DAPTransfer from AT1G19210Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0521s0050.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1559521e-105EF155952.1 Populus trichocarpa RAP2-like protein (RAP2L11) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024458985.11e-122ethylene-responsive transcription factor ERF017
TrEMBLA9PLA11e-122A9PLA1_POPTR; RAP2-like protein
STRINGPOPTR_0006s14100.11e-122(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14793399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.13e-60ERF family protein