PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0292s0020.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 130aa    MW: 14535.1 Da    PI: 6.5429
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0292s0020.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.41e-191667256
                     AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                            +y+GVr ++ +g+++AeIrd +    + +r++lg+f taeeAa+a+++a+ +++g+
  SapurV1A.0292s0020.1.p 16 KYRGVRKRP-WGKFAAEIRDSTR---HgARVWLGTFNTAEEAARAYDRAAYAMRGH 67
                            8********.**********422...25**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.4851674IPR001471AP2/ERF domain
CDDcd000185.88E-181675No hitNo description
PfamPF008473.2E-151667IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.8E-311676IPR001471AP2/ERF domain
SuperFamilySSF541712.48E-231675IPR016177DNA-binding domain
SMARTSM003801.4E-351680IPR001471AP2/ERF domain
PRINTSPR003678.8E-121728IPR001471AP2/ERF domain
PRINTSPR003678.8E-124056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    Send to blast
MDEDGAKSRD EGGEVKYRGV RKRPWGKFAA EIRDSTRHGA RVWLGTFNTA EEAARAYDRA  60
AYAMRGHLAI LNFPNEYPNM ASAGSNSSTR YSGSSSSSSM QPEVFEFECL DDKLLEEMLE  120
QEEKRGKKK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-3711291131Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0292s0020.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011029836.18e-52PREDICTED: ethylene-responsive transcription factor ERF096
SwissprotQ9LTC55e-44ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A2G9I9T04e-49A0A2G9I9T0_9LAMI; Uncharacterized protein
STRINGXP_010039174.15e-45(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27033215
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.12e-26ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]