PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0257s0020.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 183aa    MW: 20203.1 Da    PI: 4.7784
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0257s0020.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.55.8e-121965252
                     AP2  2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkk 52
                             ykGVr+++ rg + AeI d +     r  r +lg+  taeeAa+aa +a+k+
  SapurV1A.0257s0020.1.p 19 FYKGVRRRS-RGEYSAEIGDpF-----RkIRLWLGTCTTAEEAAAAAYKAKKE 65
                            7*****888.8*********66.....45******************999885 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003806.8E-51974IPR001471AP2/ERF domain
PROSITE profilePS5103213.5111976IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-101969IPR016177DNA-binding domain
PRINTSPR003679.1E-62031IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.1E-142062IPR001471AP2/ERF domain
PfamPF008475.7E-52065IPR001471AP2/ERF domain
PRINTSPR003679.1E-64258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MIHVVFLIST SKFPYPSPFY KGVRRRSRGE YSAEIGDPFR KIRLWLGTCT TAEEAAAAAY  60
KAKKEEFDNK MALERPNNLQ IDTKVVSEEF NGLCFHPSPS SVLAVPTMSS LGHGLESNVE  120
MIGESSEKNQ SISDLWEERA LSPLGKSFLI EPISLPMDGV MDLPNIEVET TLAFVEGILN  180
FA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0257s0020.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006374367.24e-56ethylene-responsive transcription factor ERF073
TrEMBLA0A2K1XID29e-55A0A2K1XID2_POPTR; Uncharacterized protein
STRINGPOPTR_0015s06470.16e-55(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF134512027
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.16e-10related to AP2 6