PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0210s0020.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 277aa    MW: 30448.9 Da    PI: 5.6794
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0210s0020.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.7e-192674355
                     AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                            + GVr+++ +gr++AeIrdps+   + r++lg+f+taeeAa a+++a+++++g
  SapurV1A.0210s0020.1.p 26 FLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAEEAALAYDRAARSMRG 74
                            56******.**********965...5*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.83E-312581No hitNo description
SMARTSM003801.4E-342588IPR001471AP2/ERF domain
PROSITE profilePS5103220.7192582IPR001471AP2/ERF domain
PRINTSPR003673.5E-82637IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.2E-292682IPR001471AP2/ERF domain
SuperFamilySSF541715.75E-212683IPR016177DNA-binding domain
PfamPF008476.1E-122874IPR001471AP2/ERF domain
PRINTSPR003673.5E-84864IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MNPSSSKGKK KQQQQVQQEA GTGLRFLGVR RRPWGRYAAE IRDPSTKERH WLGTFDTAEE  60
AALAYDRAAR SMRGSRARTN FVYSDMPAGS SVTSIISPDE QQSLQQHQHQ QHGGNDNNLS  120
SLLFNVPSLH DHHQQDSTPI FNQDFSSQCH LVEGFSSTTS GGEFWSCSSN NNSCNQQLQH  180
AIQNNVLSHD FPSDTFHGSG YNTGQCDWID SSTSGLMGFE DQTTMTNGLE SVGCSSGSYF  240
GFDSGEYVHS PLFSRMPPVS DTAPDGFDLG SSSYFF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-212681359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0210s0020.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011001503.11e-150PREDICTED: ethylene-responsive transcription factor LEP-like
TrEMBLB9MUQ11e-151B9MUQ1_POPTR; Uncharacterized protein
STRINGPOPTR_0001s15710.11e-151(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39043161
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.13e-28ERF family protein