PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0052s0250.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 313aa    MW: 35351.1 Da    PI: 6.0153
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0052s0250.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.6e-1977125355
                     AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                             y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a+++ ++k++g
  SapurV1A.0052s0250.1.p  77 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDREARKIRG 125
                             9*******.**********954...4************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.2E-3276134IPR001471AP2/ERF domain
SMARTSM003804.2E-3976139IPR001471AP2/ERF domain
SuperFamilySSF541712.48E-2276134IPR016177DNA-binding domain
PROSITE profilePS5103223.77576133IPR001471AP2/ERF domain
PfamPF008476.4E-1277125IPR001471AP2/ERF domain
PRINTSPR003678.2E-127788IPR001471AP2/ERF domain
CDDcd000184.91E-3377134No hitNo description
PRINTSPR003678.2E-1299115IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MCGGAILADL IPRNRGHRVA ASEFWPNSSF KKPGPFDSYP SPIRNQESFT LKRSQTTSGD  60
HEQVEKPNAK RQRKNLYRGI RQRPWGKWAA EIRDPRKGVR VWLGTFNTAE EAARAYDREA  120
RKIRGKKAKV NFPNEDEHRY TSQNTKTKPF LHQAPTCHFS KGYDSGYGYD GYQIKTYHSN  180
GLINEPIVTS GEDDSASGSE EVTGLLGCNQ NVESNNYTGQ VKVEEEKLEE EKKGMNKEVV  240
VVDLETREEE SEVQKLTEEL MAYENFMKFY QIPYLDGQST APNGTTQESL VDSLWNFFDD  300
CADAPVTSAA PL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-2277133360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
5wx9_A2e-21771351574Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0052s0250.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002320996.10.0ethylene-responsive transcription factor ERF071
TrEMBLB9I9P10.0B9I9P1_POPTR; Uncharacterized protein
STRINGPOPTR_0014s12090.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67713449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.12e-34ethylene-responsive element binding protein