PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0012s0580.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 230aa    MW: 24845.8 Da    PI: 9.7562
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0012s0580.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.1e-202776255
                     AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                            +++GVr ++ +gr++AeIrdps+   + r++lg+f+taeeAa+a++ a+++++g
  SapurV1A.0012s0580.1.p 27 HFRGVRKRP-WGRYAAEIRDPSK---KSRVWLGTFDTAEEAARAYDTAAREFRG 76
                            69*******.**********965...6************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.5E-132776IPR001471AP2/ERF domain
SMARTSM003803.0E-402790IPR001471AP2/ERF domain
PROSITE profilePS5103223.962784IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-222785IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.9E-322784IPR001471AP2/ERF domain
CDDcd000181.38E-322785No hitNo description
PRINTSPR003674.6E-112839IPR001471AP2/ERF domain
PRINTSPR003674.6E-115066IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MAPREKKAAI KADGGGGGGG GGGKEVHFRG VRKRPWGRYA AEIRDPSKKS RVWLGTFDTA  60
EEAARAYDTA AREFRGSKAK TNFPYPSCEN AKKNVVSIDN SKKAANKNNS CGGGNQSPSH  120
STVEFSSGDA PLDLNLDPGA STVRLPFQPM VMNHQQVIYF DALMKSQYRR MVFDHGYRHH  180
PDQSVVFSCG GVLSDSDSSS VVDLNHQDVK TPRRSVGLDL NLPPPPEIA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-221785473Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0012s0580.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011027786.11e-126PREDICTED: ethylene-responsive transcription factor 4
TrEMBLA0A2K1YG087e-91A0A2K1YG08_POPTR; Uncharacterized protein
STRINGPOPTR_0004s04720.11e-121(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.12e-26erf domain protein 9