PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0006s1530.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family HSF
Protein Properties Length: 343aa    MW: 39011.7 Da    PI: 4.853
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0006s1530.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind108.74.4e-34461372102
                             HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXX CS
            HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkk 88 
                             Fl+k++++++d+ +++++sws+ g sfvv+d+++f+ ++Lp++Fkh+nf+SFvRQLn+YgF+k++ ++         weF+++ F +
  SapurV1A.0006s1530.1.p  46 FLTKTFDMVDDPMTNHIVSWSRGGFSFVVWDPDSFSINILPRFFKHNNFSSFVRQLNTYGFRKIDPDR---------WEFANEGFLR 123
                             9****************************************************************999.........********** PP

                             XXXXXXXXXXXXXX CS
            HSF_DNA-bind  89 gkkellekikrkks 102
                             g+k+ l++ikrkk 
  SapurV1A.0006s1530.1.p 124 GQKQFLRNIKRKKA 137
                             ************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004151.4E-5642135IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene3DG3DSA:1.10.10.103.0E-3742135IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467852.45E-3442135IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF004475.0E-3046135