PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sopen11g027090.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
Family bZIP
Protein Properties Length: 454aa    MW: 50754.8 Da    PI: 6.9286
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sopen11g027090.1genomespennView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.83.1e-10150189440
                       XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHH CS
            bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLea 40 
                        k  rr+++NReAAr+sR+RKka++++Le+   + ++Le+
  Sopen11g027090.1 150 AKTLRRLAQNREAARKSRLRKKAYVQQLETsrmRLAQLEQ 189
                       6889************************983334444444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-8147223IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-7148194No hitNo description
PROSITE profilePS502179.255149193IPR004827Basic-leucine zipper domain
PfamPF001701.9E-7150190IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.61E-6151193No hitNo description
CDDcd147084.04E-22151203No hitNo description
PROSITE patternPS000360154169IPR004827Basic-leucine zipper domain
PfamPF141441.1E-26231306IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    Send to blast
MESQRIGDTT STLSIDHDMT YNTSFMYHST LNNNNQEPST FDFGELEEAI VLQGVKMNND  60
DSFKSSLYGA GINRPAATLE MFPSWPTKVH HTPRGSSKSI GGEQSSDSDS ALNTTISSRG  120
EANVELESPS KSNYAKRKGA GSNSDRVTDA KTLRRLAQNR EAARKSRLRK KAYVQQLETS  180
RMRLAQLEQE LQRARSQGIF MGGGSTGPNI SSGASMFDME YSRWLDDDQR QICELRTALQ  240
AHLGDGELRI IVDAYIAHYD HIFLLKGVVA KSDLFHLLTG IWASPAERGF LWLGGFKPSD  300
LIKMLITQLD PLTQQQIVGI YSLQQSSQQA EEALSQGLEQ LKQSLIETIA TCSVNDGMHH  360
MAIALGKLAN LESFVHQADN LRQQTIHQLH RILTIRQSAR CFMMIGEYYG RLRALSSLWT  420
SRPRETMVAD DNSCQTTSEL QMIQASQHHX EAKI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754501e-150HG975450.1 Solanum pennellii chromosome ch11, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015057833.10.0PREDICTED: transcription factor HBP-1b(c38)-like
SwissprotO241601e-124TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLK4D9Z50.0K4D9Z5_SOLLC; Uncharacterized protein
STRINGSolyc11g068370.1.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36832340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-175bZIP family protein