PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sopen11g020170.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
Family bZIP
Protein Properties Length: 365aa    MW: 40038.9 Da    PI: 8.8764
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sopen11g020170.1genomespennView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.83.5e-11287342559
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke.leelkkevakl 59 
                       +r +r++kNRe+A rsR RK+a++ eLe +v++L++  ++L+k+ +e ++k+  +l
  Sopen11g020170.1 287 RRRKRMIKNRESAARSRDRKQAYTLELEAEVAKLKEIKQELQKKqAEFIEKQKNQL 342
                       689************************************99765145555555555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-12283348IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.5E-12284342No hitNo description
PROSITE profilePS5021710.151285330IPR004827Basic-leucine zipper domain
PfamPF001702.2E-9287345IPR004827Basic-leucine zipper domain
CDDcd147071.13E-22287341No hitNo description
SuperFamilySSF579595.42E-9287335No hitNo description
PROSITE patternPS000360290305IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    Send to blast
MGSYLNFKNF ADTSQPESSG NNSNFFLARQ SSIYSFTFDE LQSTCGLGKD FGSMNMDDLL  60
KNIEESQALS SSAALGGNLQ RQGSLTLPRT LSQKTVDEVW RDFQKESVVA NDASGTGGSN  120
FGQRESTLGE MTLEEFLVRA GAVQEDMQPA GYSNDVTFAS GFTQPSSSVT IAFQQATQNP  180
GHQIAGNNIF NVVSTTTSSP QQPLFPKQTT VEFASPMQLG SPGKRLPMSN PSANTSSVMQ  240
GGVMTMPVKG VSPGNLDTSS LSPSPYACGE GGRGRRSCTS FEKVVERRRK RMIKNRESAA  300
RSRDRKQAYT LELEAEVAKL KEIKQELQKK QAEFIEKQKN QLLEKMNVPW ENKLICLRRT  360
VTGPW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB6756920.0AB675692.1 Solanum lycopersicum SlABF4 mRNA for ABA responsive transcription factor, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015058946.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7
RefseqXP_015058945.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7
SwissprotQ9M7Q43e-86AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
SwissprotQ9M7Q36e-86AI5L6_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 6
TrEMBLG5EM380.0G5EM38_SOLLC; ABA responsive transcription factor
TrEMBLK4D8C30.0K4D8C3_SOLLC; Uncharacterized protein
STRINGSolyc11g044560.1.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7762497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49720.11e-68abscisic acid responsive element-binding factor 1