PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sopen10g030950.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
Family bZIP
Protein Properties Length: 439aa    MW: 49621.4 Da    PI: 6.2795
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sopen10g030950.2genomespennView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.92.9e-10169198534
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeek 34 
                       k  rr+++NReAAr+sR RKka++++Le+ 
  Sopen10g030950.2 169 KTLRRLAQNREAARKSRIRKKAYVQQLETS 198
                       7789***********************974 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.6E-8161212No hitNo description
PfamPF077162.3E-8165208IPR004827Basic-leucine zipper domain
SMARTSM003383.3E-6165225IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.749167211IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.48E-7169208No hitNo description
CDDcd147082.17E-21169221No hitNo description
PROSITE patternPS000360172187IPR004827Basic-leucine zipper domain
PfamPF141441.2E-28261336IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    Send to blast
MDSSNNQISF INQHQFFHDP RQQQQQQQQM ENHKNHQISF GLSSANPGNF INKENNGGAY  60
DLGELDQALF LYLDGQDPSS SSIQDHRQNN YGMRPPTLNI FPSQPMHIEP SSTKANNNEM  120
VSQATNGSKK SSQPSMDKSE PPKVTKGEGS RKVSTSSPEQ DAPKTSDPKT LRRLAQNREA  180
ARKSRIRKKA YVQQLETSRI RLTQLEHEIQ RARSQGFHVG GNVLLGGDQG FQLINRTNIS  240
SDAAVFDLEY ARWLEEHHRL ICELRNAVHE EQLQEDELRI YVENCVVHYD NIMNLKGMLA  300
KSDVFHLVSG LWKSPAERCF LWIGDFRPSE ILKIIMCQIE ALTENQLLGM CGLQKSTQEA  360
EDALSQGLET LNQSLSDTII ASDALILGNN NENMGNYMAL AINQLSTVEA FLRQYKAEQD  420
RWPDLTPHPT ALAYVSVKN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754491e-153HG975449.1 Solanum pennellii chromosome ch10, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015089651.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X2
SwissprotP239237e-89HBP1B_WHEAT; Transcription factor HBP-1b(c38)
TrEMBLK4D2T10.0K4D2T1_SOLLC; Uncharacterized protein
STRINGSolyc10g080410.1.10.0(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-146bZIP family protein