PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sopen06g030780.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
Family bZIP
Protein Properties Length: 501aa    MW: 55630.2 Da    PI: 7.0323
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sopen06g030780.1genomespennView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.21e-09198236543
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 
                       k  rr+++NReAA++sR RKka++++Le+    L++  +
  Sopen06g030780.1 198 KTLRRLAQNREAAKKSRIRKKAYVQQLETSRIRLSQLEQ 236
                       6789************************86655555554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.8E-5192271IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.1E-7196240No hitNo description
PROSITE profilePS502179.059196240IPR004827Basic-leucine zipper domain
PfamPF077164.1E-8196240IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-6198240No hitNo description
CDDcd147083.63E-20198250No hitNo description
PROSITE patternPS000360201216IPR004827Basic-leucine zipper domain
PfamPF141445.0E-32279353IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    Send to blast
MASQGIGETG LTDSGSSHHN HNMPYAVYRG LNPASTSFMY HSTPNGNQEG AGFDFGELEE  60
AFVLQGFKMS NDEAKASLYA AAATGKPAAT LEMFPSWPMR YQQTPRENSK SREESTDSGS  120
LSSRAQPHFE PESPISRKAS SDHQLQITHK SQEQQQLQDM ASNNNPRTGV LQTELSSKSN  180
SEKKKGAAST SERVLDPKTL RRLAQNREAA KKSRIRKKAY VQQLETSRIR LSQLEQELQR  240
ASSQGIFLGG GTAAGSNISS GAAIFDMEYS RWLDDDHRHI AELRTALQAH LSDGDLRLIV  300
DGYLAHYDEI FSLKGVAAKS DVFHLITGMW TTPAERCFLW MGGFRPSELI KMLIGQLDPL  360
TEQQVVGIYS LQQSSQQAEE ALSQGLEQLQ QSLIDTIATA SLHDGMHHMA LALGKLSNLE  420
GFVRQADNLR QQTLHQLHRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLIADDN  480
SCQTITGLQM VQSSQNHFSN F
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT6933870.0KT693387.1 Capsicum annuum AILZ1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015080261.10.0PREDICTED: transcription factor TGA2
SwissprotO241601e-133TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLK4C9F00.0K4C9F0_SOLLC; Uncharacterized protein
STRINGSolyc06g074320.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36832340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-169bZIP family protein