PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sopen06g004280.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
Family bZIP
Protein Properties Length: 144aa    MW: 16626.6 Da    PI: 5.3327
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sopen06g004280.1genomespennView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.81e-122482563
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                      ++ +r+++NRe+A+rsR +K++++eeL  +  +L+++N+  + ++++ + ++ + ++e+
  Sopen06g004280.1 24 RKRKRMESNRESAKRSRMKKQQRLEELSSETTQLQNQNSICRGKIDSVERNYRSIDAEN 82
                      5789**********************************************999998887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.6E-162084IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.0E-122075No hitNo description
PROSITE profilePS5021711.1742285IPR004827Basic-leucine zipper domain
PfamPF001709.5E-102475IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.75E-112476No hitNo description
CDDcd147021.61E-172576No hitNo description
PROSITE patternPS0003602742IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MSSTPQLVSS GSDADQRYAK FDERKRKRME SNRESAKRSR MKKQQRLEEL SSETTQLQNQ  60
NSICRGKIDS VERNYRSIDA ENNVLRAQLA ELTERLNSLN SLTQFWADTT GFPVDIPEIP  120
DTLLEPWQLP CPIQPITASD MFQF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754450.0HG975445.1 Solanum pennellii chromosome ch06, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015079463.11e-103PREDICTED: bZIP transcription factor 53-like
SwissprotQ9LZP81e-44BZP53_ARATH; bZIP transcription factor 53
TrEMBLA0A0V0I5Y01e-101A0A0V0I5Y0_SOLCH; Putative ocs element-binding factor 1-like
STRINGSolyc06g009640.1.16e-99(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28102351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.16e-46basic region/leucine zipper motif 53