PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sopen02g036670.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
Family bZIP
Protein Properties Length: 214aa    MW: 24730.6 Da    PI: 10.5749
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sopen02g036670.1genomespennView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.54.5e-11114169560
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                       ++ rr+ +NRe+ArrsR RK++ +e+L++ +  L+  N++  ++l  ++ +++ ++
  Sopen02g036670.1 114 RKRRRMVSNRESARRSRMRKQKHLENLRNQANRLKVGNREIMNRLRLITHQCQVVQ 169
                       6789999******************************************9999666 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-11110174IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.036112175IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.84E-10114165No hitNo description
PfamPF001707.1E-8114167IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.6E-8114166No hitNo description
CDDcd147022.66E-15115166No hitNo description
PROSITE patternPS000360117132IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MLSTFPATTL SADGLFSNLF PAFDGGFTPW ECIEPAFLFS QQVESVVSPK ESPPPEPVIS  60
NSDSGSDDSK PNSVHSSSGS DDPNRNTNNN NKSNRCPDER KRQRTTSNRD MDERKRRRMV  120
SNRESARRSR MRKQKHLENL RNQANRLKVG NREIMNRLRL ITHQCQVVQC ENERLRTESA  180
ILRQRLEGIR QILINRQFNS YSAWACNNME QRPH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
199117RKRQRTTSNRDMDERKRRR
2113117RKRRR
3113134RKRRRMVSNRESARRSRMRKQK
4126133RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754410.0HG975441.1 Solanum pennellii chromosome ch02, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015064395.11e-157PREDICTED: basic leucine zipper 63-like
TrEMBLK4BD061e-155K4BD06_SOLLC; Uncharacterized protein
STRINGSolyc02g092090.1.11e-155(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28202251
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22850.24e-33basic leucine-zipper 6