PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sopen01g050310.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
Family bZIP
Protein Properties Length: 413aa    MW: 44918.1 Da    PI: 10.1616
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sopen01g050310.1genomespennView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.14e-13335390559
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke.leelkkevakl 59 
                       +r rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+k+ +e ++k+  +l
  Sopen01g050310.1 335 RRRRRMIKNRESAARSRARKQAYTLELEAEVAKLKEINEELRKKqAEIIEKQKNQL 390
                       689**************************************976134445555555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-11331392IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.841333382IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-12335385No hitNo description
SuperFamilySSF579592.81E-9335382No hitNo description
PfamPF001705.0E-11335390IPR004827Basic-leucine zipper domain
PROSITE patternPS000360338353IPR004827Basic-leucine zipper domain
CDDcd147071.17E-22340389No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MGSYMNFKNI TDKPQVESNG GKSVGNGDFP LARQSSIYSL TFDELQTTFS GLGKDFGSIN  60
MEELLKSIWT AEESQAVTSS TGGGEDGNAP VGNLQRQGSL TLPRTLSQKT VDEVWRNFQK  120
ETTVCTPDGS DGKSNFGQRQ STLGEMTLEE FLVKAGVVRE DMQSTSNSSG ITFNNGLSQQ  180
NNNNGFNIAF QQPTQNSGLL INQIAANNML NVVGATASQQ QPPQQQQPLF PKQTTVAFAS  240
PMQLSNNGHL ASPRTTAPAV GMSSPSVNAN MAQGGVMGKT GFHNGVSPAK VGSPGNDFIA  300
RSNVDTSSLS PSPYAFSEGG RGRRSGSSLE KVVERRRRRM IKNRESAARS RARKQAYTLE  360
LEAEVAKLKE INEELRKKQA EIIEKQKNQL TDKRNMTCGY KLRCLRRTLT GPW
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00038PBMTransfer from AT4G34000Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754400.0HG975440.1 Solanum pennellii chromosome ch01, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015083782.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 4
SwissprotQ9M7Q31e-100AI5L6_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 6
TrEMBLK4B3240.0K4B324_SOLLC; Uncharacterized protein
STRINGSolyc01g108080.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7762497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34000.22e-82abscisic acid responsive elements-binding factor 3