PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_162280_gqek.t1
Common NameSOVF_162280
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family SAP
Protein Properties Length: 388aa    MW: 42886 Da    PI: 6.2854
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_162280_gqek.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP492.32.7e-150538779453
                SAP  79 vcstwravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvd.edndadalsCrclalsdkylaaGfad 169
                        vc+twravsrs+llwq+l r +W+ t+l +dtWree+i  hrt rnf   r sy++l++    v  e +d+  l+C +l l+d +la+Gf+d
  Sp_162280_gqek.t1   5 VCTTWRAVSRSELLWQNLVRIVWNSTNLRHDTWREEFISLHRTCRNFGVSRCSYFVLDHPLGGVRgEGDDPLPLLCLRLVLADDHLAVGFSD 96 
                        9********************************************************9988776515678999******************* PP

                SAP 170 GavrlfdletrlhvstflpqhrdrlGrfsravsGivisd..srlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvG 259
                        G+vr+f l +r+h+st++p  rdrlG fsravsGiv++    r+vfa+ldGdihva   + g + arra+lGdvvndGalvdf G gr+wvG
  Sp_162280_gqek.t1  97 GSVRMFYLPSRIHLSTVHPLLRDRLGLFSRAVSGIVLEPliDRVVFASLDGDIHVASPLS-GPSLARRAYLGDVVNDGALVDFNGGGRFWVG 187
                        *************************************963369*************9666.789**************************** PP

                SAP 260 lyaGvpGrafhiWdaeteelvfvGGsltdPeavmGWhmltel..telvGrvrvteretavaCtslrlvvfdlrnq..gvvlreeeerrGliv 347
                        lyaGvpGraf++Wda++e+lvf+GGsltdP++vmGWhmlte+  te+vGr+rv+ +  a+  tslr +v++l +     v++ee +rrG+iv
  Sp_162280_gqek.t1 188 LYAGVPGRAFRVWDANSEDLVFMGGSLTDPDSVMGWHMLTEIrpTEFVGRIRVAPQGLALGLTSLRALVLNLEEGvsVSVVGEETSRRGIIV 279
                        ******************************************666***************************99743457899999****** PP

                SAP 348 ssldasneayvvvdsrGvatvrrvenleevcrfrvrg...aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddr 436
                        +s+da+nea+v+vd+rGva+vr   +l+evcrf+v++   +  g++gC+n+ y+l+++gg +rvW+ ++ e ylys+re  +e  a+ a dr
  Sp_162280_gqek.t1 280 GSIDANNEAFVMVDTRGVASVRHLRTLQEVCRFSVSQrqaSLMGLIGCMNNMYVLMCSGGTIRVWDADNGE-YLYSFREWLEEPTAVAATDR 370
                        ***********************************985556678899*********************976.******************** PP

                SAP 437 hvavsssdgtihlldfg 453
                        +v ++ss++tihl+dfg
  Sp_162280_gqek.t1 371 YVVATSSHTTIHLWDFG 387
                        ****************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF813832.07E-5371IPR001810F-box domain
SuperFamilySSF509787.14E-1779215IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.102.7E-1286218IPR015943WD40/YVTN repeat-like-containing domain
Gene3DG3DSA:2.130.10.102.7E-12271386IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509787.14E-17274385IPR017986WD40-repeat-containing domain
PROSITE profilePS502948.545339388IPR017986WD40-repeat-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    Send to blast
MSSIVCTTWR AVSRSELLWQ NLVRIVWNST NLRHDTWREE FISLHRTCRN FGVSRCSYFV  60
LDHPLGGVRG EGDDPLPLLC LRLVLADDHL AVGFSDGSVR MFYLPSRIHL STVHPLLRDR  120
LGLFSRAVSG IVLEPLIDRV VFASLDGDIH VASPLSGPSL ARRAYLGDVV NDGALVDFNG  180
GGRFWVGLYA GVPGRAFRVW DANSEDLVFM GGSLTDPDSV MGWHMLTEIR PTEFVGRIRV  240
APQGLALGLT SLRALVLNLE EGVSVSVVGE ETSRRGIIVG SIDANNEAFV MVDTRGVASV  300
RHLRTLQEVC RFSVSQRQAS LMGLIGCMNN MYVLMCSGGT IRVWDADNGE YLYSFREWLE  360
EPTAVAATDR YVVATSSHTT IHLWDFGG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010689285.10.0PREDICTED: transcriptional regulator STERILE APETALA
SwissprotQ9FKH11e-130SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLA0A0K9QMH70.0A0A0K9QMH7_SPIOL; Uncharacterized protein
STRINGPOPTR_0014s16440.11e-129(Populus trichocarpa)
STRINGAl_scaffold_0007_31721e-128(Arabidopsis lyrata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-120SAP family protein