PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_149970_ueye.t1
Common NameSOVF_149970
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family bHLH
Protein Properties Length: 371aa    MW: 41082.3 Da    PI: 6.7984
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_149970_ueye.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.24.4e-113079154
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                       r++ +  rE+ RRdr+N+ f+eL + + ++     +K++Ka+iL+ +++ +++L
  Sp_149970_ueye.t1 30 RKVQKADREKLRRDRLNDHFQELGSAIDPD----RPKNDKATILTDTIQILRDL 79
                       5677889********************997....79*************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.1162979IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.07E-133099IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-1230102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.73E-103083No hitNo description
PfamPF000106.1E-93079IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.5E-83585IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MDQTLDRSQS SQLDSRQRPE AEVNDPVAVR KVQKADREKL RRDRLNDHFQ ELGSAIDPDR  60
PKNDKATILT DTIQILRDLT AEVNKLKAES NTLSEESHEL TQEKNELREE KSSLKSDIEN  120
LNAQYQQRLR VVYPWGASVE PSVVMGPPYS YPLPMPYPFF GSQNASTIPS SHPAFMPYPT  180
TPNPNVEQQP IQPAXTARDV ARPASDVAPQ RAMAXRVVYP WGASVEPSVV MGPPYSYPLP  240
MPYPFFGSQN ASTIPSSHPA FMPYPTTPNP NVEQQPIQPA TTYVMSKPDS RSKGLDSGKK  300
ARHLERTDDS SDVATELELK TPGCGRQQNS LCKQSKKKEK SAADGDSSSK VSSCQGPQES  360
SSNSVSHIPK I
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010679934.11e-115PREDICTED: transcription factor bHLH121
SwissprotQ9LT239e-65BH121_ARATH; Transcription factor bHLH121
TrEMBLA0A0K9QTH10.0A0A0K9QTH1_SPIOL; Uncharacterized protein
STRINGPOPTR_0005s11550.19e-73(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.27e-63bHLH family protein