PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_082500_zhpm.t1
Common NameSOVF_082500
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family Dof
Protein Properties Length: 119aa    MW: 11727.9 Da    PI: 6.7662
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_082500_zhpm.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof284.5e-095582734
             zf-Dof  7 kcprCdstntkfCyynnyslsqPryfCk 34
                        cp Cds++ +     nyslsqPryfC 
  Sp_082500_zhpm.t1 55 LCPSCDSADKQVLLSQNYSLSQPRYFCS 82
                       6**************************6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074783.0E-45382IPR003851Zinc finger, Dof-type
PfamPF027011.7E-65582IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    Send to blast
LLGDGGGSGG GGAGGGGGGA GAGAGGGEDK HSEWQGQDAG GGRDDGHDNN SLPHLCPSCD  60
SADKQVLLSQ NYSLSQPRYF CSPVGAVGGT GLKVVPTVTS LLVLVAVRTN APRWRLSRI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9RCD84e-79A0A0K9RCD8_SPIOL; Uncharacterized protein (Fragment)