PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_033280_ssaz.t2
Common NameSOVF_033280
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family bHLH
Protein Properties Length: 427aa    MW: 46715.8 Da    PI: 6.6251
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_033280_ssaz.t2genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.128278327IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.48E-5288332No hitNo description
SuperFamilySSF474596.28E-10288339IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.5E-7288336IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    Send to blast
MMAGNPSNWW SMHSNLRSSS SPTDHHQHNH HQQHEDEEED TNNLLISQTH PSNSLLPLQF  60
LHGSSHSSSS SSSLLPFIAS AADPHAHDFP HSWSQLLLGG MANEQEERFS SSEFEATRVI  120
NGGLQQIDVK HELSSQSNNH TTTNNNNNNN NNNNNNMELY GNQYHDQEQE VSVGVSDRVA  180
AAAVAVATTT AAANWTTHQI MPASLSPKSC ITSLSSSNNH NHNHNHNHNN SNMLDFSTNN  240
KRTLEAESHQ HADLTTTNSE QCNSTATNGG VQPPKKPRVQ PSSTPPLKVR KEKLGDRITS  300
LHQLVSPFGK TDTASVLLEA IGYIRFLQGQ IQALSSPYLG NNNASSKNNQ HSIHGERNCL  360
FPDHPGQLLN DSCLKRRGAA YQEDNKDAAS KDLLKSRGLC LVPISCTQLI GSDNGADYWA  420
QSLGGGF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010691374.11e-178PREDICTED: transcription factor bHLH68-like
TrEMBLA0A0K9RSK90.0A0A0K9RSK9_SPIOL; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.13e-65bHLH family protein