PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 402071
Common NameSELMODRAFT_402071
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
Family NAC
Protein Properties Length: 301aa    MW: 33863.7 Da    PI: 8.3995
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
402071genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM22.23.9e-0714524815127
     NAM  15 vveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkge 117
             +ve L+  ++++++++  +i++++ ++ +Pw+     + +++ +   +   k +++++r n +++   Wk++gk+++ +   + l+  k+ L +   + ++++
  402071 145 IVECLEDWISNQRINE--IIPDTNFFSKHPWNVI---TPGSSTIT-LIAPLKWKRSSQRDNTTIEGCHWKQQGKQESFVL--RGLKVEKRNLSYIATE-QHSS 238
             5677899999999776..8**************6...23334444.4444555567899999999999*********999..45678999****9544.4446 PP

     NAM 118 ktdWvmheyr 127
               +  + ey 
  402071 239 DLSFSLVEYV 248
             7777777776 PP

Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MAASGAAMLC ALPGCTKLAF FQESSGKQHE CCGRTHHLME MVRRNNGLLL NPPKLDGRCQ  60
LSSCNHPVWS GDHDFCCKRH ALECLDQTQS IVARKCELPG CDLPVCVETT ASGGIRVHDF  120
CGWSHAKLSR SQGKRRPDVL SADRIVECLE DWISNQRINE IIPDTNFFSK HPWNVITPGS  180
STITLIAPLK WKRSSQRDNT TIEGCHWKQQ GKQESFVLRG LKVEKRNLSY IATEQHSSDL  240
SFSLVEYVLS DHPQFGAFKI NARERAREKK VRVDKKKRKV DDDVKMLVDG FLADSPEVIF  300
*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1274279KKKRKV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD8QPH50.0D8QPH5_SELML; Uncharacterized protein
STRINGEFJ376210.0(Selaginella moellendorffii)
Publications ? help Back to Top
  1. Banks JA, et al.
    The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.
    Science, 2011. 332(6032): p. 960-3
    [PMID:21551031]