PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00022899-RA_Salv
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family Dof
Protein Properties Length: 198aa    MW: 22319.1 Da    PI: 9.0453
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00022899-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof118.82.1e-371673461
                 zf-Dof  4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                           + l+cprC+s+ntkfCyynnyslsqPr+fC+aC+ryWt+GG+lrnvP+Ggg rk kk 
  SMil_00022899-RA_Salv 16 DPLPCPRCNSSNTKFCYYNNYSLSQPRHFCRACKRYWTRGGTLRNVPIGGGYRKTKKF 73
                           5789***************************************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027014.2E-331772IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.9471872IPR003851Zinc finger, Dof-type
ProDomPD0074786.0E-241872IPR003851Zinc finger, Dof-type
PROSITE patternPS0136102056IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
MASLSANSVM QRSEADPLPC PRCNSSNTKF CYYNNYSLSQ PRHFCRACKR YWTRGGTLRN  60
VPIGGGYRKT KKFKRPPPPP APNPFHTMHM PPLHLNFPFL ETRVSSDTPR FDHTHAPKSG  120
FSPYFRNGFE QNIEDRADFI GFGSSNFAQQ MPCEEMQVVV GSGQIGNQIE QISSSSLLWN  180
SNDVAVWFDP SSSVSSMI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020554179.11e-41LOW QUALITY PROTEIN: dof zinc finger protein DOF1.4-like
TrEMBLA0A2G9G7Z77e-36A0A2G9G7Z7_9LAMI; Uncharacterized protein
STRINGVIT_10s0003g00040.t011e-34(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28310.15e-34Dof family protein