PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00018706-RA_Salv
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family bZIP
Protein Properties Length: 364aa    MW: 41283.7 Da    PI: 6.1845
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00018706-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.91.7e-1176108234
                            XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeek 34 
                            +++k+ rr+++NReAAr+sR+RKka++++Le+ 
  SMil_00018706-RA_Salv  76 PDDKVLRRLAQNREAARKSRLRKKAYVQQLENS 108
                            689****************************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.9E-870123No hitNo description
SMARTSM003388.4E-575128IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.02577121IPR004827Basic-leucine zipper domain
PfamPF001705.6E-878107IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.75E-779120No hitNo description
PROSITE patternPS0003608297IPR004827Basic-leucine zipper domain
PfamPF141446.3E-28166241IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MNSTTTQFVP SRRMGLYEPV HQMSMWGDFR NTLLDSSPPP ELMLEVNANL DNQSEDTTSQ  60
GTFAASHRND QEASKPDDKV LRRLAQNREA ARKSRLRKKA YVQQLENSKL RLIQLEQELN  120
RVRQQQGLCV GGGIDTSQLA YTGNSNPGIS AFELEYGHWV EEQNRQISDL KNALHSDMGD  180
TELQIFVDGG MQHYFELFSM KVMAARADVF YIMSGMWKTS AERFFLWIGG FRPSELVKVL  240
SPHLDALSEQ QRLDIVNLTQ SCQQAEDALS QGMEKLQFIL AQAIADGLLQ EGNYLPQIGA  300
AMNKLDDLVR FVVQADHLRQ ETLQQLSRIL TTRQAARGLL ALGEYLQRLR ALSSCWSSRP  360
REQA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011090575.10.0transcription factor TGA1
RefseqXP_011090576.10.0transcription factor TGA1
SwissprotQ392371e-172TGA1_ARATH; Transcription factor TGA1
TrEMBLA0A4D8YK340.0A0A4D8YK34_SALSN; Transcription factor TGA
STRINGMigut.H02410.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7802497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.51e-175bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Herrera-Vásquez A, et al.
    Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis.
    Plant Mol. Biol. Rep., 2018.
    [PMID:26696694]
  4. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  5. Sun T, et al.
    TGACG-BINDING FACTOR 1 (TGA1) and TGA4 regulate salicylic acid and pipecolic acid biosynthesis by modulating the expression of SYSTEMIC ACQUIRED RESISTANCE DEFICIENT 1 (SARD1) and CALMODULIN-BINDING PROTEIN 60g (CBP60g).
    New Phytol., 2018. 217(1): p. 344-354
    [PMID:28898429]