PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00015267-RA_Salv
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family bZIP
Protein Properties Length: 477aa    MW: 52808.2 Da    PI: 7.2396
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00015267-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.83.2e-10173202433
                            XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLee 33 
                             k  rr+++NReAAr+sR+RKka++++Le 
  SMil_00015267-RA_Salv 173 AKTLRRLAQNREAARKSRLRKKAYVQQLES 202
                            5889************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.0E-5170247IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.0E-7172216No hitNo description
PROSITE profilePS502179.117172216IPR004827Basic-leucine zipper domain
PfamPF001702.4E-7173208IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.93E-6174216No hitNo description
PROSITE patternPS000360177192IPR004827Basic-leucine zipper domain
PfamPF141447.8E-33255330IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    Send to blast
MASHRVGEAD SGAPHHHHIP YAIPHMLHHP NNSTFINQEG SAFDFGELEE AIILQGVKIN  60
NDDKKQPLYT AIRPAATLDM FPSWPMRFQQ HTLRGSSKSG EESTDSGSAV NTLSNTPESP  120
SDHRQPPPPP PQMDAAGGID SPRLSGSHSQ PAAKPAPEKR RGPGSNSDKV LDAKTLRRLA  180
QNREAARKSR LRKKAYVQQL ESSRIRLAQL EQDLQRARSQ GLFLGGGGAA SGSISSGGAI  240
FDMEYSRWLD DDHRHMSELR TALQAHLSDG DLRVIVDGYI AHYDEVFRLK GAAAKSDVFH  300
LITGMWTTPA ERCFLWMGGF RPSDLIKMLI PQLDPLTEQQ FMGICSLQHS SQQAEEALSQ  360
GLEQLQQSLV DTIANGSAND SMHHMAVALG KLANLEGFVR QADNLRQQTL HQLHRLLTIR  420
QAARCFLVIG EYYGRLRALS SLWASRPRES MIADDNSCQT TTDLQMVQSS QNQFSNF
Functional Description ? help Back to Top
Source Description
UniProtTogether with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011088884.10.0transcription factor TGA9 isoform X2
SwissprotQ93XM60.0TGA9_ARATH; Transcription factor TGA9
TrEMBLA0A4D8ZWL60.0A0A4D8ZWL6_SALSN; Transcription factor TGA
STRINGEOY334490.0(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36832340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-172bZIP family protein
Publications ? help Back to Top
  1. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  2. Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
    Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
    Plant Sci., 2016. 252: p. 12-21
    [PMID:27717447]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]