PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00009644-RA_Salv
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family C2H2
Protein Properties Length: 877aa    MW: 100240 Da    PI: 9.0202
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00009644-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.11E-52756No hitNo description
PROSITE profilePS5015711.2813057IPR007087Zinc finger, C2H2
SMARTSM003550.00943052IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002803252IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0051973Biological Processpositive regulation of telomerase activity
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 877 aa     Download sequence    Send to blast
MDGNPSRMET SQQLIILGDD FAQNFKTKSF RCSFCKRGFS NAQALGGHMN IHRKDRAKLR  60
EFSDENLLSL EISRSVNSDD SLPPESLLGE KLSLKNDLSH DGDDQATNLN SCVKAPATEI  120
NDDVESKQLE LKHGELDLEL RLGPEPHHHA KSKPLTLERE SSIRTKLCVY GKTTGIYEFN  180
EDPQGMESAD RNDIMVPASV DNEYIVLEED NGKELVTTTK SPGCSSYITK SKFMSLYTRT  240
TLASFHDALL KLNAAQQDAI RDTGFGNMLD LTVKELPGRL AYWALKSFNP KTCELEISSN  300
FRVKVTVDDV YRAFGLPKGD QKIKRFDRQT SNELFDEWFS LFGVENRDKI KIGLVLNEML  360
HYKNGGIWFK RHFMIAMCLS LFESFSNGTV HPHILYTLFD VENLDKWDWA EYMLRSLVEN  420
RETWRGDDSK MYIGPSLFLV RIEMKRPRFG IGRLREPLKL PERYGYNKKY PMKCQAKIEE  480
LCSDKGEFND NEVMEWENDA HTLGLHRILP LDLNVSPTSS LFLLSLISSD ASVFHPHAWR  540
QEASKLPEVI KLISHILHTS MACNNNELSL VVYRHHQPHM VLSSKTSCRQ IDSPLFLPLR  600
QPPSSFRLPH PLALLHFSVS LLISSPHWRL PLLNLWTHPL LKSSYEFLRI GVEYRLIIAS  660
IISSLFDVAK KGKSRSQRKT FSKGTDTKVK YQLNILPQTE PPMFNGSHAL QKSSRIKCRD  720
LRIVLSLQRP FLLVITFSEM SHLLLFKVAI LTKQGTSKIE ASAQLASFQT SLQPTELSVC  780
AEKEFRQIGS SVVLVMCTRK HTFKFVVHPA TRPARVQSYQ RQPSRAGPAR VKSYPRQPSR  840
DNMPEQIYQR QHARAEISET TKDRVQPETA LPRALPE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.18e-15C2H2 family protein