PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00003999-RA_Salv
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family NAC
Protein Properties Length: 175aa    MW: 20068.7 Da    PI: 5.0193
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00003999-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM26.12.3e-08734101128
                    NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
                              ++ L fy+g+ p+g+kt W mhe+r+
  SMil_00003999-RA_Salv   7 RNRRALEFYEGKPPNGQKTVWKMHEFRV 34 
                            6799**********************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100517.31160IPR003441NAC domain
SuperFamilySSF1019415.36E-11860IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
LAAVPMRNRR ALEFYEGKPP NGQKTVWKMH EFRVNGVTRK KTSADDMRLD DWVLCRVYAK  60
SSRVINNRKS PLQANREAAL VTNQEMIENA SIVPENPEQN MINTDFSVQD LLQESDLRLS  120
YFQSYNLDGI VAPIEQQLMN NPYVNGELLP LPLPNVDAQQ ENIDTNFYAP MPNKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.11e-18NAC domain containing protein 32