PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00003243-RA_Salv
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family C2H2
Protein Properties Length: 309aa    MW: 34580.6 Da    PI: 7.9827
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00003243-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.16.7e-0580102123
                            EEETTTTEEESSHHHHHHHHHHT CS
                zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                            ++C+ Cg++F ++ +L+rH +tH
  SMil_00003243-RA_Salv  80 HPCSACGEVFQSSPLLERHRSTH 102
                            78********************6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.9380102IPR007087Zinc finger, C2H2
SuperFamilySSF563999.59E-13114305No hitNo description
Gene3DG3DSA:3.90.228.103.3E-8119304IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MVSIRPTFLS LFFLLLHLPC FTPSPRRRRS RSTAPKTSFF SFFKRLFSNS NPLPPPPPPS  60
RRSPSSSTRS LRLSPTLDIH PCSACGEVFQ SSPLLERHRS THHLVSELAA DDENIVRIIF  120
NTGWPDPART PNIERILKIH NTPAITSRFE EYRERVKSRA AAAPPPRRDE RCVADGNELL  180
RFHCTTFVCG LDSGDECGRL YCSLCGIIRS GFSPKMDGIS TLPTSYAAHV SMPADMEAEF  240
EFMNVRRAVL VCRVIAGRVG CDPWEADKED PGFDSLAGRG EGDDEDEILV FNPRAVLPCF  300
VIVLNCFKP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078217.11e-120PREDICTED: uncharacterized protein LOC105162016
TrEMBLA0A103XNK31e-107A0A103XNK3_CYNCS; Uncharacterized protein
STRINGSolyc06g076820.1.11e-104(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA118341821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29660.19e-76C2H2 family protein