PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_20966.1_g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family G2-like
Protein Properties Length: 88aa    MW: 10418.6 Da    PI: 7.7841
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_20966.1_g00001.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like231.7e-076786322
                  G2-like  3 rlrWtpeLHerFveaveqLG 22
                              ++Wt++LH++F+++v+qLG
  Sme2.5_20966.1_g00001.1 67 YIKWTEDLHAKFMDVVHQLG 86
                             589****************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.6E-56386IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    Send to blast
MRSKKEREGL GNNNIVGEDE ESREEESNNI HEAENDIMLT GRYKPRKKRS RKSMKEINEG  60
ESRRKNYIKW TEDLHAKFMD VVHQLGEG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015165596.18e-18PREDICTED: putative two-component response regulator ARR13
TrEMBLM1DU285e-17M1DU28_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000944059e-18(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384