PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_07976.1_g00003.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family G2-like
Protein Properties Length: 435aa    MW: 49033.2 Da    PI: 8.334
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_07976.1_g00003.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like21.64.9e-07174192422
                  G2-like   4 lrWtpeLHerFveaveqLG 22 
                              + Wt++LH++F+ea+eqLG
  Sme2.5_07976.1_g00003.1 174 IIWTNDLHAKFIEALEQLG 192
                              68****************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.1E-5170197IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
MLMSAGRLCP RLGLRLVGVM QAEDRPGSLI LRLICDRDFG NFNFLALRCG WRVPGGAIIL  60
GWRYVVPGPL MLCLICVGDL KPSGIVYDLN FEIVCDEYNE LLAMNALKNG AHLCVKRPCG  120
EMIMEESRKV EKDVVSNENY KLKRKKGRKG GKEINEGEGQ SSVINKTVTH KNYIIWTNDL  180
HAKFIEALEQ LGEGSDMDLS CLMTYVEQLE GKSLEKEGVV RSKGLNLRVI GCNKAPRGDD  240
GMTHLRCPKC GRNHDGTYWR DISACFGCGE MGHKILDYPY AQNKGKGGDI DQRGAPRHNW  300
FYALQRKQRG DEMLNDITGC DPVWQEKGLN LRFVGPHRVL RSIAKVFYEL ELPMGTNRVH  360
LFIHVSMLRG YVGDPNAIEL FEVVGVVVNE LTYEEVPVEM LCKHVIRLRI IGVASIKVLW  420
GINKLKVLFV EPERA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA127