PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_07094.1_g00005.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family G2-like
Protein Properties Length: 374aa    MW: 42102.7 Da    PI: 8.0783
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_07094.1_g00005.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like21.26.4e-07234255122
                  G2-like   1 kprlrWtpeLHerFveaveqLG 22 
                              k r  Wt +LH++F++a+e+LG
  Sme2.5_07094.1_g00005.1 234 KSRTLWTDDLHAKFMKALEHLG 255
                              67999****************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.6E-5233258IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MYKYIFRGWL DTAGSARAMG RLRLDGVEVR LGLRFVGENF WCDAVVWHEY GGHHHFRPLI  60
LTSPDVQARG PLAQDLHCGL TSSPTSELLL VYYVTTLIFQ ILFVLAVCNE YNEQHSVMKS  120
LNIGTYIVVE QPLDEKIVDD LWQFVLRKKI KKEKAVEGLE ENEVEKNVDD NGNNNIIGNT  180
EEQDGKKNNV PKIEEQSNNI HEVENVVVSN EKCKQRTKRG MENITIVNEN IGKKSRTLWT  240
DDLHAKFMKA LEHLGEGKNF GNHGRASYYK VAGCKPSADI PSRKAPADRR GRPAAVGRVR  300
QGRGATIACD QPEPEIIPPT AGSVTPPVLE AHRQEAGSSQ VARRDSFRAR DFLACRPPEF  360
FGSKPSKDPQ EFVR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1287293DRRGRPA
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384