PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_00787.1_g00017.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family ERF
Protein Properties Length: 211aa    MW: 21988 Da    PI: 6.9217
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_00787.1_g00017.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP227.58.1e-093462234
                      AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslg 34
                             +y+GVr+++ +gr++AeIrdp++   + r++lg
  Sme2.5_00787.1_g00017.1 34 HYRGVRRRP-WGRYAAEIRDPVK---KCRVWLG 62
                             6********.**********654...5999998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.48E-143472No hitNo description
Gene3DG3DSA:3.30.730.102.2E-123463IPR001471AP2/ERF domain
PfamPF008473.0E-43463IPR001471AP2/ERF domain
SuperFamilySSF541715.82E-83463IPR016177DNA-binding domain
SMARTSM003801.4E-93476IPR001471AP2/ERF domain
PROSITE profilePS5103212.8533463IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MAPKGKCTTA ETAAAAVEGR VNGVTNGAVV KEVHYRGVRR RPWGRYAAEI RDPVKKCRVW  60
LGARAKTNFP IVLQPEEVNR SLSLSQNSSV ESSPAAPTAV EAAAAVTVAV AAPMVESLPL  120
DLSLGSSSSV GKFLFQKPQF HVAQIDGGVT GGITPLRYCM DAERGAGVIH HGGGDGGDAG  180
SVMKCESASS SVIDFMGLDL DLNLPPSPED M
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009618542.12e-43PREDICTED: ethylene-responsive transcription factor 4-like
RefseqXP_016448710.12e-43PREDICTED: ethylene-responsive transcription factor 4-like
TrEMBLE7FKW35e-42E7FKW3_TOBAC; Ethylene response factor 6b
STRINGXP_009618542.19e-43(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.12e-16ethylene response factor 7