PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Solyc10g076920.1.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
Family bZIP
Protein Properties Length: 284aa    MW: 31436.6 Da    PI: 7.8018
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Solyc10g076920.1.1genomeITAGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.51.4e-08254275526
                         CHHHCHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKka 26 
                         +r++r++kNRe+A rsR+RK+ 
  Solyc10g076920.1.1 254 RRQKRMIKNRESAARSRARKQV 275
                         79******************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.5E-6247276No hitNo description
CDDcd147078.46E-13254275No hitNo description
SuperFamilySSF579599.75E-5254278No hitNo description
PROSITE patternPS000360257272IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MVIQEMGSRG GGEAKANALA TQGSLYSLTL DEVRNQLGNC GKPLNSMNLD EFVKTVWTIE  60
SNQEVVGGND YGPVQQGASQ HHPSSITMSR DLSKKTVDEV WQDIQQGVKI DNVDKRSQER  120
QLTLGEITLE DFLVKAGVIA ESTQGKRISG LVFGVDSMSL TQQAQWTHYQ IPAMQQVPEQ  180
QHQQQQQNIP PVFMPGHPIQ QPLPVVANPI MDATYPETQV TMSPAHIIGT LSDTQTSGRK  240
RVAPRDVAEN SIERRQKRMI KNRESAARSR ARKQVLLLIL HLL*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Les.155990.0fruit| leaf| root
Cis-element ? help Back to Top
SourceLink
PlantRegMapSolyc10g076920.1.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2331290.0Solanum lycopersicum strain Heinz 1706 chromosome 10 clone hba-248a13 map 10, complete sequence
GenBankAC2389170.0Solanum lycopersicum strain Heinz 1706 chromosome 10 clone hba-20a12 map 10, complete sequence
GenBankAC2389210.0Solanum lycopersicum strain Heinz 1706 chromosome 10 clone hba-234c10 map 10, complete sequence
GenBankAC2395350.0Solanum lycopersicum strain Heinz 1706 chromosome 2 clone hba-111j2 map 2, complete sequence
GenBankAC2402200.0Solanum lycopersicum strain Heinz 1706 chromosome 10 clone sle-23g5 map 10, complete sequence
GenBankAC2402230.0Solanum lycopersicum strain Heinz 1706 chromosome 10 clone sle-56g22 map 10, complete sequence
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004249091.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
RefseqXP_019071679.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
RefseqXP_025888939.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A3Q7IK210.0A0A3Q7IK21_SOLLC; Uncharacterized protein
STRINGSolyc10g076920.1.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33342448
Representative plantOGRP5401580
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.18e-63ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Wang Y,van der Hoeven RS,Nielsen R,Mueller LA,Tanksley SD
    Characteristics of the tomato nuclear genome as determined by sequencing undermethylated EcoRI digested fragments.
    Theor. Appl. Genet., 2005. 112(1): p. 72-84
    [PMID:16208505]