PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 676752122
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
Family ERF
Protein Properties Length: 156aa    MW: 17044.1 Da    PI: 6.9196
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
676752122genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.77.6e-1591139153
        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                +++kGVr ++ +g+W AeI++ps+   ++r +lg+f t e+A +a+++a +k+
  676752122  91 KKHKGVRKKP-SGKWSAEIWVPSK---KARTWLGTFPTYEKAVQAYEEAENKF 139
                589****999.7*********965...6*********************9997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.16E-2091141No hitNo description
SuperFamilySSF541717.19E-1492141IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.109.2E-1892141IPR001471AP2/ERF domain
PROSITE profilePS5103217.20192150IPR001471AP2/ERF domain
PfamPF008471.7E-892139IPR001471AP2/ERF domain
SMARTSM003803.1E-1892156IPR001471AP2/ERF domain
PRINTSPR003678.7E-693104IPR001471AP2/ERF domain
PRINTSPR003678.7E-6115131IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
MDDPENVQSY VQNENVTPVS QPSYLTRDQE HEIMVSTLRQ VISSPGGDTS SSNWIASGDL  60
PPPDAGPCPI CGVIGCYGCA FPRPLEITKE KKHKGVRKKP SGKWSAEIWV PSKKARTWLG  120
TFPTYEKAVQ AYEEAENKFA GIRSGDVGHG EGSVHK
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap676752122
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018436240.13e-88PREDICTED: putative ethylene-responsive transcription factor ERF121
SwissprotQ9FGC92e-62EF121_ARATH; Putative ethylene-responsive transcription factor ERF121
TrEMBLA0A397YK608e-86A0A397YK60_BRACM; Uncharacterized protein
TrEMBLM4D6L48e-86M4D6L4_BRARP; Uncharacterized protein
STRINGBra012123.1-P1e-86(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM34721562
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67010.16e-65ERF family protein