PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 676747288
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
Family bHLH
Protein Properties Length: 495aa    MW: 55673.3 Da    PI: 7.1404
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
676747288genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.80.0004727531039
               HHHHHHHHHHHHHHHCTSCCC...TTS-ST CS
        HLH 10 rrRRdriNsafeeLrellPkaskapskKls 39
               r RR++iN+++ +L   lP+    +++Kl+
  676747288 27 RERREQINQSLMKLSFSLPSK---SKPKLT 53
               89******************8...788864 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF126561.5E-22160233IPR026822Spp2/MOS2, G-patch domain
SMARTSM004431.1E-6185231IPR000467G-patch domain
PROSITE profilePS5017411.433187233IPR000467G-patch domain
SMARTSM007390.013264291IPR005824KOW
SMARTSM007390.13434461IPR005824KOW
CDDcd131532.86E-13438488No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009870Biological Processdefense response signaling pathway, resistance gene-dependent
GO:0042742Biological Processdefense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0003676Molecular Functionnucleic acid binding
Sequence ? help Back to Top
Protein Sequence    Length: 495 aa     Download sequence    Send to blast
MYLRTPKSPT EFNLCDSHRL SVYVPVRERR EQINQSLMKL SFSLPSKSKP KLTSTTDVNN  60
NNAVNDGNSK EFVTEFDPSK TLTDSTPKHV IPPIENTWRP HKKMKNIDLP FQSSNTGSGL  120
EFEPEVPSTE GSDNNITYGL KLRQKVVKEE DQKLQAPLEQ LMLQSLRKDL ESLADDPTLE  180
DFESVPVDGF GAALMAGYGW KPGKGIGKNA KEDVEIKEYK KWTAKEGLGF DLDRSKVVVD  240
TKAKVKESLK LESKGRGFGD GGDLFFVGKE VRIVGGRDMG LKGKIVEKVG SDLFVVKISG  300
SDDEVEVGVD EVADLGSQEE EKCLKKLKDL QLKDKEKVDK RSRGTEREKS RNEVRVSEKH  360
DRSQTRERRV KKQPSWLRSH IKVRIVSKDL KGGRLYLKKG KVVDVVGPTT CDITMDETQE  420
LVQGVDQELL ETALPRRGGP VLVLSGKYKG VYGNLVEKDL DKETGVVRDL DNHKMLDVRL  480
EQVAEYMGDM DDIEY
Functional Description ? help Back to Top
Source Description
UniProtRequired for innate and induced resistance to pathogens such as compatible and incompatible isolates of P.syringae and P.parasitica. {ECO:0000269|PubMed:16271871}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap676747288
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006415079.10.0protein MOS2
SwissprotQ9C8010.0MOS2_ARATH; Protein MOS2
TrEMBLA0A1J3ERD80.0A0A1J3ERD8_NOCCA; Protein MOS2 (Fragment)
STRINGXP_006415079.10.0(Eutrema salsugineum)
Publications ? help Back to Top
  1. Zhang Y,Cheng YT,Bi D,Palma K,Li X
    MOS2, a protein containing G-patch and KOW motifs, is essential for innate immunity in Arabidopsis thaliana.
    Curr. Biol., 2005. 15(21): p. 1936-42
    [PMID:16271871]
  2. Wu X, et al.
    A role for the RNA-binding protein MOS2 in microRNA maturation in Arabidopsis.
    Cell Res., 2013. 23(5): p. 645-57
    [PMID:23399598]
  3. Copeland C,Xu S,Qi Y,Li X
    MOS2 has redundant function with its homolog MOS2H and is required for proper splicing of SNC1.
    Plant Signal Behav, 2014.
    [PMID:23803746]
  4. Zang S, et al.
    GPKOW is essential for pre-mRNA splicing in vitro and suppresses splicing defect caused by dominant-negative DHX16 mutation in vivo.
    Biosci. Rep., 2014. 34(6): p. e00163
    [PMID:25296192]
  5. Zhang R,Qi H,Sun Y,Xiao S,Lim BL
    Transgenic Arabidopsis thaliana containing increased levels of ATP and sucrose is more susceptible to Pseudomonas syringae.
    PLoS ONE, 2017. 12(2): p. e0171040
    [PMID:28152090]